Deep learning

Machine learning applied to prediction of relapse, hospitalization, and suicide in bipolar disorder using neuroimaging and clinical data: A systematic review

Sat, 2024-06-22 06:00

J Affect Disord. 2024 Jun 20:S0165-0327(24)00992-3. doi: 10.1016/j.jad.2024.06.061. Online ahead of print.

ABSTRACT

BACKGROUND: Bipolar disorder (BD) is a mental disorder associated with increased morbidity/mortality. Adverse outcome prediction helps with the management of patients with BD.

METHODS: We systematically reviewed the performance of machine learning (ML) studies in predicting adverse outcomes (relapse or recurrence, hospital admission, and suicide-related events) in patients with BD. Demographic, clinical, and neuroimaging-related poor outcome predictors were also reviewed. Three databases (PubMed, Scopus, and Web of Science) were explored from inception to July 2023.

RESULTS: Eighteen studies, accounting for >30,000 patients, were included. Support vector machine, decision trees, random forest, and logistic regression were the most frequently used ML algorithms. ML models' area under the receiver operating characteristic (ROC) curve (AUC), sensitivity, and specificity ranged from 0.71 to 0.98, 72.7-92.8 %, and 59.0-95.2 % for relapse/recurrence prediction (5 studies (3 on relapses and 1 on recurrences). The corresponding values were 0.78-0.88, 21.4-100 %, and 77.0-99.7 % for hospital admissions (3 studies, 21,266 patients), and 0.71-0.99, 44.4-97.9 %, and 38.9-95.0 % for suicide-related events (10 studies, 5558 patients). Also, one study addressed a combination of the interest outcomes. Adverse outcome predictors included early onset BD, type I BD, comorbid psychiatric or substance use disorder, circadian rhythm disruption, hospitalization characteristics, and neuroimaging parameters, including increased dynamic amplitude of low-frequency fluctuation, decreased frontolimbic functional connectivity and aberrant dynamic FC in corticostriatal circuitry.

CONCLUSIONS: ML models can predict adverse outcomes of BD with relatively acceptable performance measures. Future studies with larger samples and nested cross-validation validation should be conducted to reach more reliable results.

PMID:38908556 | DOI:10.1016/j.jad.2024.06.061

Categories: Literature Watch

Insights into traditional Large Deformation Diffeomorphic Metric Mapping and unsupervised deep-learning for diffeomorphic registration and their evaluation

Sat, 2024-06-22 06:00

Comput Biol Med. 2024 Jun 21;178:108761. doi: 10.1016/j.compbiomed.2024.108761. Online ahead of print.

ABSTRACT

This paper explores the connections between traditional Large Deformation Diffeomorphic Metric Mapping methods and unsupervised deep-learning approaches for non-rigid registration, particularly emphasizing diffeomorphic registration. The study provides useful insights and establishes connections between the methods, thereby facilitating a profound understanding of the methodological landscape. The methods considered in our study are extensively evaluated in T1w MRI images using traditional NIREP and Learn2Reg OASIS evaluation protocols with a focus on fairness, to establish equitable benchmarks and facilitate informed comparisons. Through a comprehensive analysis of the results, we address key questions, including the intricate relationship between accuracy and transformation quality in performance, the disentanglement of the influence of registration ingredients on performance, and the determination of benchmark methods and baselines. We offer valuable insights into the strengths and limitations of both traditional and deep-learning methods, shedding light on their comparative performance and guiding future advancements in the field.

PMID:38908357 | DOI:10.1016/j.compbiomed.2024.108761

Categories: Literature Watch

Deep learning based diagnosis of PTSD using 3D-CNN and resting-state fMRI data

Sat, 2024-06-22 06:00

Psychiatry Res Neuroimaging. 2024 Jun 17;343:111845. doi: 10.1016/j.pscychresns.2024.111845. Online ahead of print.

ABSTRACT

BACKGROUND: The incidence rate of Posttraumatic stress disorder (PTSD) is currently increasing due to wars, terrorism, and pandemic disease situations. Therefore, accurate detection of PTSD is crucial for the treatment of the patients, for this purpose, the present study aims to classify individuals with PTSD versus healthy control.

METHODS: The resting-state functional MRI (rs-fMRI) scans of 19 PTSD and 24 healthy control male subjects have been used to identify the activation pattern in most affected brain regions using group-level independent component analysis (ICA) and t-test. To classify PTSD-affected subjects from healthy control six machine learning techniques including random forest, Naive Bayes, support vector machine, decision tree, K-nearest neighbor, linear discriminant analysis, and deep learning three-dimensional 3D-CNN have been performed on the data and compared.

RESULTS: The rs-fMRI scans of the most commonly investigated 11 regions of trauma-exposed and healthy brains are analyzed to observe their level of activation. Amygdala and insula regions are determined as the most activated regions from the regions-of-interest in the brain of PTSD subjects. In addition, machine learning techniques have been applied to the components extracted from ICA but the models provided low classification accuracy. The ICA components are also fed into the 3D-CNN model, which is trained with a 5-fold cross-validation method. The 3D-CNN model demonstrated high accuracies, such as 98.12%, 98.25 %, and 98.00 % on average with training, validation, and testing datasets, respectively.

CONCLUSION: The findings indicate that 3D-CNN is a surpassing method than the other six considered techniques and it helps to recognize PTSD patients accurately.

PMID:38908302 | DOI:10.1016/j.pscychresns.2024.111845

Categories: Literature Watch

PCa-RadHop: A transparent and lightweight feed-forward method for clinically significant prostate cancer segmentation

Sat, 2024-06-22 06:00

Comput Med Imaging Graph. 2024 Jun 10;116:102408. doi: 10.1016/j.compmedimag.2024.102408. Online ahead of print.

ABSTRACT

Prostate Cancer is one of the most frequently occurring cancers in men, with a low survival rate if not early diagnosed. PI-RADS reading has a high false positive rate, thus increasing the diagnostic incurred costs and patient discomfort. Deep learning (DL) models achieve a high segmentation performance, although require a large model size and complexity. Also, DL models lack of feature interpretability and are perceived as "black-boxes" in the medical field. PCa-RadHop pipeline is proposed in this work, aiming to provide a more transparent feature extraction process using a linear model. It adopts the recently introduced Green Learning (GL) paradigm, which offers a small model size and low complexity. PCa-RadHop consists of two stages: Stage-1 extracts data-driven radiomics features from the bi-parametric Magnetic Resonance Imaging (bp-MRI) input and predicts an initial heatmap. To reduce the false positive rate, a subsequent stage-2 is introduced to refine the predictions by including more contextual information and radiomics features from each already detected Region of Interest (ROI). Experiments on the largest publicly available dataset, PI-CAI, show a competitive performance standing of the proposed method among other deep DL models, achieving an area under the curve (AUC) of 0.807 among a cohort of 1,000 patients. Moreover, PCa-RadHop maintains orders of magnitude smaller model size and complexity.

PMID:38908295 | DOI:10.1016/j.compmedimag.2024.102408

Categories: Literature Watch

Biclustering for Epi-Transcriptomic Co-functional Analysis

Sat, 2024-06-22 06:00

Methods Mol Biol. 2024;2822:293-309. doi: 10.1007/978-1-0716-3918-4_19.

ABSTRACT

Dynamic and reversible N6-methyladenosine (m6A) modifications are associated with many essential cellular functions as well as physiological and pathological phenomena. In-depth study of m6A co-functional patterns in epi-transcriptomic data may help to understand its complex regulatory mechanisms. In this chapter, we describe several biclustering mining algorithms for epi-transcriptomic data to discover potential co-functional patterns. The concepts and computational methods discussed in this chapter will be particularly useful for researchers working in related fields. We also aim to introduce new deep learning techniques into the field of co-functional analysis of epi-transcriptomic data.

PMID:38907925 | DOI:10.1007/978-1-0716-3918-4_19

Categories: Literature Watch

DeepHLApan: A Deep Learning Approach for the Prediction of Peptide-HLA Binding and Immunogenicity

Sat, 2024-06-22 06:00

Methods Mol Biol. 2024;2809:237-244. doi: 10.1007/978-1-0716-3874-3_15.

ABSTRACT

Neoantigens are crucial in distinguishing cancer cells from normal ones and play a significant role in cancer immunotherapy. The field of bioinformatics prediction for tumor neoantigens has rapidly developed, focusing on the prediction of peptide-HLA binding affinity. In this chapter, we introduce a user-friendly tool named DeepHLApan, which utilizes deep learning techniques to predict neoantigens by considering both peptide-HLA binding affinity and immunogenicity. We provide the application of DeepHLApan, along with the source code, docker version, and web-server. These resources are freely available at https://github.com/zjupgx/deephlapan and http://pgx.zju.edu.cn/deephlapan/ .

PMID:38907901 | DOI:10.1007/978-1-0716-3874-3_15

Categories: Literature Watch

Deep Learning-Based HLA Allele Imputation Applicable to GWAS

Sat, 2024-06-22 06:00

Methods Mol Biol. 2024;2809:77-85. doi: 10.1007/978-1-0716-3874-3_5.

ABSTRACT

Human leukocyte antigen (HLA) imputation is an essential step following genome-wide association study, particularly when putative associations in HLA genes are identified, to fully understand the genetic basis of human traits. Different HLA imputation methods have been developed, each with its own advantages, and recent methods have been improved in terms of imputation accuracy and computational costs. Here, I describe Deep*HLA, a recently published method that employs deep learning algorithms to accurately impute HLA alleles from regional single nucleotide variants. Deep*HLA was trained and benchmarked on two reference panels of different ancestries. Deep*HLA achieved high imputation accuracy with relatively mild reduced imputation accuracy for rare alleles. I provide a detailed protocol for running Deep*HLA, including instructions for data preprocessing, model training, and imputation. Deep*HLA is implemented in Python 3 and is freely available.

PMID:38907891 | DOI:10.1007/978-1-0716-3874-3_5

Categories: Literature Watch

The beating heart: artificial intelligence for cardiovascular application in the clinic

Sat, 2024-06-22 06:00

MAGMA. 2024 Jun 22. doi: 10.1007/s10334-024-01180-9. Online ahead of print.

ABSTRACT

Artificial intelligence (AI) integration in cardiac magnetic resonance imaging presents new and exciting avenues for advancing patient care, automating post-processing tasks, and enhancing diagnostic precision and outcomes. The use of AI significantly streamlines the examination workflow through the reduction of acquisition and postprocessing durations, coupled with the automation of scan planning and acquisition parameters selection. This has led to a notable improvement in examination workflow efficiency, a reduction in operator variability, and an enhancement in overall image quality. Importantly, AI unlocks new possibilities to achieve spatial resolutions that were previously unattainable in patients. Furthermore, the potential for low-dose and contrast-agent-free imaging represents a stride toward safer and more patient-friendly diagnostic procedures. Beyond these benefits, AI facilitates precise risk stratification and prognosis evaluation by adeptly analysing extensive datasets. This comprehensive review article explores recent applications of AI in the realm of cardiac magnetic resonance imaging, offering insights into its transformative potential in the field.

PMID:38907767 | DOI:10.1007/s10334-024-01180-9

Categories: Literature Watch

Trend Identification and Prediction of Worker Stress Rate Using Deep Learning Algorithm in Indonesia

Sat, 2024-06-22 06:00

Workplace Health Saf. 2024 Jun 22:21650799241263623. doi: 10.1177/21650799241263623. Online ahead of print.

NO ABSTRACT

PMID:38907692 | DOI:10.1177/21650799241263623

Categories: Literature Watch

Inter-Rater and Intra-Rater Agreement in Scoring Severity of Rodent Cardiomyopathy and Relation to Artificial Intelligence-Based Scoring

Sat, 2024-06-22 06:00

Toxicol Pathol. 2024 Jun 22:1926233241259998. doi: 10.1177/01926233241259998. Online ahead of print.

ABSTRACT

We previously developed a computer-assisted image analysis algorithm to detect and quantify the microscopic features of rodent progressive cardiomyopathy (PCM) in rat heart histologic sections and validated the results with a panel of five veterinary toxicologic pathologists using a multinomial logistic model. In this study, we assessed both the inter-rater and intra-rater agreement of the pathologists and compared pathologists' ratings to the artificial intelligence (AI)-predicted scores. Pathologists and the AI algorithm were presented with 500 slides of rodent heart. They quantified the amount of cardiomyopathy in each slide. A total of 200 of these slides were novel to this study, whereas 100 slides were intentionally selected for repetition from the previous study. After a washout period of more than six months, the repeated slides were examined to assess intra-rater agreement among pathologists. We found the intra-rater agreement to be substantial, with weighted Cohen's kappa values ranging from k = 0.64 to 0.80. Intra-rater variability is not a concern for the deterministic AI. The inter-rater agreement across pathologists was moderate (Cohen's kappa k = 0.56). These results demonstrate the utility of AI algorithms as a tool for pathologists to increase sensitivity and specificity for the histopathologic assessment of the heart in toxicology studies.

PMID:38907685 | DOI:10.1177/01926233241259998

Categories: Literature Watch

Quantum error-correction using humming sparrow optimization based self-adaptive deep cnn noise correction module

Fri, 2024-06-21 06:00

Sci Rep. 2024 Jun 21;14(1):14289. doi: 10.1038/s41598-024-65182-2.

ABSTRACT

The error correction model's main purpose in heavy hexagonal quantum codes is to improve their reliability for quantum computing applications. Existing challenges include finding the optimal decoder for quantum error correction in heavy hexagonal codes. This research propels the frontier of quantum error correction, with a specific focus on tailoring topological quantum error-correcting codes for the unique challenges posed by superconducting qubits in quantum computers. In response, this research harnesses the power of deep learning, presenting a Humming sparrow optimization based self-adaptive deep CNN (HSO-based SADCNN) model designed for heavy hexagonal codes. This decoder incorporates a Self-adaptive Deep CNN (SADCNN) Noise Correction Module, a sophisticated component to refine error correction. The proposed decoder's efficacy is rigorously evaluated across varying code distances (three, five, and seven) using the Humming Sparrow Optimization (HSO) algorithm. HSO, intricately designed to fine-tune the SADCNN decoder, significantly enhances its error correction capabilities for heavy hexagonal quantum codes. The algorithm seamlessly integrates advantageous characteristics of herding and tracing from Humming Bird optimization and Sparrow search optimization, representing a critical stride in advancing the reliability of quantum computing applications, particularly within the intricate domain of heavy hexagonal quantum codes. Based upon the achievements, the Training Percentage (TP) 90 metrics demonstrate significant progress, boasting a commendable accuracy of 97.35 % , coupled with reduced logical error probability and a diminished bit error rate, marked at 5.51 and 3.72, respectively.

PMID:38906948 | DOI:10.1038/s41598-024-65182-2

Categories: Literature Watch

A survey of brain functional network extraction methods using fMRI data

Fri, 2024-06-21 06:00

Trends Neurosci. 2024 Jun 20:S0166-2236(24)00091-2. doi: 10.1016/j.tins.2024.05.011. Online ahead of print.

ABSTRACT

Functional network (FN) analyses play a pivotal role in uncovering insights into brain function and understanding the pathophysiology of various brain disorders. This paper focuses on classical and advanced methods for deriving brain FNs from functional magnetic resonance imaging (fMRI) data. We systematically review their foundational principles, advantages, shortcomings, and interrelations, encompassing both static and dynamic FN extraction approaches. In the context of static FN extraction, we present hypothesis-driven methods such as region of interest (ROI)-based approaches as well as data-driven methods including matrix decomposition, clustering, and deep learning. For dynamic FN extraction, both window-based and windowless methods are surveyed with respect to the estimation of time-varying FN and the subsequent computation of FN states. We also discuss the scope of application of the various methods and avenues for future improvements.

PMID:38906797 | DOI:10.1016/j.tins.2024.05.011

Categories: Literature Watch

High-quality AFM image acquisition of living cells by modified residual encoder-decoder network

Fri, 2024-06-21 06:00

J Struct Biol. 2024 Jun 19:108107. doi: 10.1016/j.jsb.2024.108107. Online ahead of print.

ABSTRACT

Atomic force microscope enables ultra-precision imaging of living cells. However, atomic force microscope imaging is a complex and time-consuming process. The obtained images of living cells usually have low resolution and are easily influenced by noise leading to unsatisfactory imaging quality, obstructing the research and analysis based on cell images. Herein, an adaptive attention image reconstruction network based on residual encoder-decoder was proposed, through the combination of deep learning technology and atomic force microscope imaging supporting high-quality cell image acquisition. Compared with other learning-based methods, the proposed network showed higher peak signal-to-noise ratio, higher structural similarity and better image reconstruction performances. In addition, the cell images reconstructed by each method were used for cell recognition, and the cell images reconstructed by the proposed network had the highest cell recognition rate. The proposed network has brought insights into the atomic force microscope-based imaging of living cells and cell image reconstruction, which is of great significance in biological and medical research.

PMID:38906499 | DOI:10.1016/j.jsb.2024.108107

Categories: Literature Watch

Spiking generative adversarial network with attention scoring decoding

Fri, 2024-06-21 06:00

Neural Netw. 2024 Jun 1;178:106423. doi: 10.1016/j.neunet.2024.106423. Online ahead of print.

ABSTRACT

Generative models based on neural networks present a substantial challenge within deep learning. As it stands, such models are primarily limited to the domain of artificial neural networks. Spiking neural networks, as the third generation of neural networks, offer a closer approximation to brain-like processing due to their rich spatiotemporal dynamics. However, generative models based on spiking neural networks are not well studied. Particularly, previous works on generative adversarial networks based on spiking neural networks are conducted on simple datasets and do not perform well. In this work, we pioneer constructing a spiking generative adversarial network capable of handling complex images and having higher performance. Our first task is to identify the problems of out-of-domain inconsistency and temporal inconsistency inherent in spiking generative adversarial networks. We address these issues by incorporating the Earth-Mover distance and an attention-based weighted decoding method, significantly enhancing the performance of our algorithm across several datasets. Experimental results reveal that our approach outperforms existing methods on the MNIST, FashionMNIST, CIFAR10, and CelebA. In addition to our examination of static datasets, this study marks our inaugural investigation into event-based data, through which we achieved noteworthy results. Moreover, compared with hybrid spiking generative adversarial networks, where the discriminator is an artificial analog neural network, our methodology demonstrates closer alignment with the information processing patterns observed in the mouse. Our code can be found at https://github.com/Brain-Cog-Lab/sgad.

PMID:38906053 | DOI:10.1016/j.neunet.2024.106423

Categories: Literature Watch

Exploration on OCT biomarker candidate related to macular edema caused by diabetic retinopathy and retinal vein occlusion in SD-OCT images

Fri, 2024-06-21 06:00

Sci Rep. 2024 Jun 21;14(1):14317. doi: 10.1038/s41598-024-63144-2.

ABSTRACT

To improve the understanding of potential pathological mechanisms of macular edema (ME), we try to discover biomarker candidates related to ME caused by diabetic retinopathy (DR) and retinal vein occlusion (RVO) in spectral-domain optical coherence tomography images by means of deep learning (DL). 32 eyes of 26 subjects with non-proliferative DR (NPDR), 77 eyes of 61 subjects with proliferative DR (PDR), 120 eyes of 116 subjects with branch RVO (BRVO), and 17 eyes of 15 subjects with central RVO (CRVO) were collected. A DL model was implemented to guide biomarker candidate discovery. The disorganization of the retinal outer layers (DROL), i.e., the gray value of the retinal tissues between the external limiting membrane (ELM) and retinal pigment epithelium (RPE), the disrupted and obscured rate of the ELM, ellipsoid zone (EZ), and RPE, was measured. In addition, the occurrence, number, volume, and projected area of hyperreflective foci (HRF) were recorded. ELM, EZ, and RPE are more likely to be obscured in RVO group and HRFs are observed more frequently in DR group (all P ≤ 0.001). In conclusion, the features of DROL and HRF can be possible biomarkers related to ME caused by DR and RVO in OCT modality.

PMID:38906954 | DOI:10.1038/s41598-024-63144-2

Categories: Literature Watch

Automated cooling tower detection through deep learning for Legionnaires' disease outbreak investigations: a model development and validation study

Fri, 2024-06-21 06:00

Lancet Digit Health. 2024 Jul;6(7):e500-e506. doi: 10.1016/S2589-7500(24)00094-3.

ABSTRACT

BACKGROUND: Cooling towers containing Legionella spp are a high-risk source of Legionnaires' disease outbreaks. Manually locating cooling towers from aerial imagery during outbreak investigations requires expertise, is labour intensive, and can be prone to errors. We aimed to train a deep learning computer vision model to automatically detect cooling towers that are aerially visible.

METHODS: Between Jan 1 and 31, 2021, we extracted satellite view images of Philadelphia (PN, USA) and New York state (NY, USA) from Google Maps and annotated cooling towers to create training datasets. We augmented training data with synthetic data and model-assisted labelling of additional cities. Using 2051 images containing 7292 cooling towers, we trained a two-stage model using YOLOv5, a model that detects objects in images, and EfficientNet-b5, a model that classifies images. We assessed the primary outcomes of sensitivity and positive predictive value (PPV) of the model against manual labelling on test datasets of 548 images, including from two cities not seen in training (Boston [MA, USA] and Athens [GA, USA]). We compared the search speed of the model with that of manual searching by four epidemiologists.

FINDINGS: The model identified visible cooling towers with 95·1% sensitivity (95% CI 94·0-96·1) and a PPV of 90·1% (95% CI 90·0-90·2) in New York City and Philadelphia. In Boston, sensitivity was 91·6% (89·2-93·7) and PPV was 80·8% (80·5-81·2). In Athens, sensitivity was 86·9% (75·8-94·2) and PPV was 85·5% (84·2-86·7). For an area of New York City encompassing 45 blocks (0·26 square miles), the model searched more than 600 times faster (7·6 s; 351 potential cooling towers identified) than did human investigators (mean 83·75 min [SD 29·5]; mean 310·8 cooling towers [42·2]).

INTERPRETATION: The model could be used to accelerate investigation and source control during outbreaks of Legionnaires' disease through the identification of cooling towers from aerial imagery, potentially preventing additional disease spread. The model has already been used by public health teams for outbreak investigations and to initialise cooling tower registries, which are considered best practice for preventing and responding to outbreaks of Legionnaires' disease.

FUNDING: None.

PMID:38906615 | DOI:10.1016/S2589-7500(24)00094-3

Categories: Literature Watch

Patient's airway monitoring during cardiopulmonary resuscitation using deep networks

Fri, 2024-06-21 06:00

Med Eng Phys. 2024 Jul;129:104179. doi: 10.1016/j.medengphy.2024.104179. Epub 2024 May 9.

ABSTRACT

Cardiopulmonary resuscitation (CPR) is a crucial life-saving technique commonly administered to individuals experiencing cardiac arrest. Among the important aspects of CPR is ensuring the correct airway position of the patient, which is typically monitored by human tutors or supervisors. This study aims to utilize deep transfer learning for the detection of the patient's correct and incorrect airway position during cardiopulmonary resuscitation. To address the challenge of identifying the airway position, we curated a dataset consisting of 198 recorded video sequences, each lasting 6-8 s, showcasing both correct and incorrect airway positions during mouth-to-mouth breathing and breathing with an Ambu Bag. We employed six cutting-edge deep networks, namely DarkNet19, EfficientNetB0, GoogleNet, MobileNet-v2, ResNet50, and NasnetMobile. These networks were initially pre-trained on computer vision data and subsequently fine-tuned using the CPR dataset. The validation of the fine-tuned networks in detecting the patient's correct airway position during mouth-to-mouth breathing achieved impressive results, with the best sensitivity (98.8 %), specificity (100 %), and F-measure (97.2 %). Similarly, the detection of the patient's correct airway position during breathing with an Ambu Bag exhibited excellent performance, with the best sensitivity (100 %), specificity (99.8 %), and F-measure (99.7 %).

PMID:38906566 | DOI:10.1016/j.medengphy.2024.104179

Categories: Literature Watch

Deep learning-designed implant-supported posterior crowns: Assessing time efficiency, tooth morphology, emergence profile, occlusion, and proximal contacts

Fri, 2024-06-21 06:00

J Dent. 2024 Jun 19:105142. doi: 10.1016/j.jdent.2024.105142. Online ahead of print.

ABSTRACT

OBJECTIVES: To compare the outcomes of implant support crowns (ISCs) designed using deep learning (DL) software with those of ISCs designed by a technician using conventional computer-aided design software.

METHODS: Twenty resin-based partially edentulous casts (maxillary and mandibular) used for fabricating ISCs were evaluated retrospectively. ISCs were designed using a DL-based method with no modification of the as-generated outcome (DB), a DL-based method with further optimization by a dental technician (DM), and a conventional computer-aided design method by a technician (NC). Time efficiency, crown contour, occlusal table area, cusp angle, cusp height, emergence profile angle, occlusal contacts, and proximal contacts were compared among groups. Depending on the distribution of measured data, various statistical methods were used for comparative analyses with a significance level of 0.05.

RESULTS: ISCs in the DB group showed a significantly higher efficiency than those in the DM and NC groups (P≤0.001). ISCs in the DM group exhibited significantly smaller volume deviations than those in the DB group when superimposed on ISCs in the NC group (DB-NC vs. DM-NC pairs, P≤0.008). Except for the number and intensity of occlusal contacts (P≤0.004), ISCs in the DB and DM groups had occlusal table areas, cusp angles, cusp heights, proximal contact intensities, and emergence profile angles similar to those in the NC group (P≥0.157).

CONCLUSIONS: A DL-based method can be beneficial for designing posterior ISCs in terms of time efficiency, occlusal table area, cusp angle, cusp height, proximal contact, and emergence profile, similar to the conventional human-based method.

CLINICAL SIGNIFICANCE: A deep learning-based design method can achieve clinically acceptable functional properties of posterior ISCs. However, further optimization by a technician could improve specific outcomes, such as the crown contour or emergence profile angle.

PMID:38906454 | DOI:10.1016/j.jdent.2024.105142

Categories: Literature Watch

Beneficial effect of residential greenness on sperm quality and the role of air pollution: A multicenter population-based study

Fri, 2024-06-21 06:00

Sci Total Environ. 2024 Jun 19:174038. doi: 10.1016/j.scitotenv.2024.174038. Online ahead of print.

ABSTRACT

BACKGROUND: Poor sperm quality is a major cause of male infertility. However, evidence remains scarce on how greenness affects male sperm quality.

OBJECTIVES: To assess the associations of residential greenness with male sperm quality and the modification effect of air pollution exposure on the relationship.

METHODS: A total of 78,742 samples from 33,184 sperm donors from 6 regions across China during 2014-2020 were included and analyzed. Individual residential greenness exposures of study subjects were estimated using the Normalized Difference Vegetation Index (NDVI) during the entire (0-90 lag days) and two key stages (0-37, and 34-77 lag days) of sperm development. Contemporaneous personal exposure levels to air pollutants were estimated using a spatio-temporal deep learning method. Linear mixed models were employed to assess the impact of greenspace in relation to sperm quality. The modification effect of air pollution on the greenspace-sperm quality relationship was also estimated.

RESULTS: Per IQR increment in NDVI exposure throughout spermatogenesis were statistically associated with increasing sperm count by 0.0122 (95 % CI: 0.0007, 0.0237), progressive motility by 0.0162 (95 % CI: 0.0045, 0.0280), and total motility by 0.0147 (95 % CI: 0.0014, 0.0281), respectively. Similar results were observed when the model added air pollutants (PM1, PM2.5 or O3) for adjustment. Additionally, specific air pollutants, including PM1, PM2.5, and O3, were found to modify this association. Notably, the protective effects of greenness exposure were more pronounced at higher concentrations of PM1 and PM2.5 and lower concentrations of O3 (all Pinteraction < 0.05). Statistically significant positive effects of NDVI were observed on sperm motility in early spermatogenesis and sperm count in late spermatogenesis.

CONCLUSIONS: Exposure to residential greenness may have beneficial effects on sperm quality and air pollution modifies their relationship. These findings highlight the importance of adopting adaptable urban greenspace planning and policies to safeguard male fertility against environmental factors.

PMID:38906295 | DOI:10.1016/j.scitotenv.2024.174038

Categories: Literature Watch

AiCarePWP: Deep learning-based novel research for Freezing of Gait forecasting in Parkinson

Fri, 2024-06-21 06:00

Comput Methods Programs Biomed. 2024 Jun 7;254:108254. doi: 10.1016/j.cmpb.2024.108254. Online ahead of print.

ABSTRACT

BACKGROUND AND OBJECTIVES: Episodes of Freezing of Gait (FoG) are among the most debilitating motor symptoms of Parkinson's Disease (PD), leading to falls and significantly impacting patients' quality of life. Accurate assessment of FoG by neurologists provides crucial insights into patients' conditions and disease symptoms. This proposed strategy involves utilizing a Weighted Fuzzy Logic Controller, Kalman Filter, and Kaiser-Meyer-Olkin test to detect the gait parameters while walking, resting, and standing phases. Parameters such as neuromodulation format, intensity, duration, frequency, and velocity are computed to pre-empt freezing episodes, thus aiding their prevention.

METHOD: The AiCarePWP is a wearable electronics device designed to identify instances when a patient is on the brink of experiencing a freezing episode and subsequently deliver a brief electrical impulse to the patient's shank muscles to stimulate movement. The AiCarePWP wearable device aims to identify impending freezing episodes in PD patients and deliver brief electrical impulses to stimulate movement. The study validates this innovative approach using plantar insoles with a 3D accelerometer and electrical stimulator, analysing data from the inertial measuring unit and plantar-pressure foot data to detect and predict FoG.

RESULTS: Using a Convolutional Neural Network-based model, the study evaluated 47 gait features for their ability to differentiate resting, standing, and walking conditions. Variable selection was based on sensitivity, specificity, and overall accuracy, followed by Principal Component Analysis and Varimax rotation to extract and interpret factors. Factors with eigenvalues exceeding 1.0 were retained, and 37 features were retained.

CONCLUSION: This study validates CNN's effectiveness in detecting FoG during various activities. It introduces a novel cueing method using electrical stimulation, which improves gait function and reduces FoG incidence in PD patients. Trustworthy wearable devices, based on Artificial Intelligence of Things (AIoT) and Artificial Intelligence of Medical Things (AIoMT), have been developed to support such interventions.

PMID:38905989 | DOI:10.1016/j.cmpb.2024.108254

Categories: Literature Watch

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